Python : Easy Way To Do Geometric Mean In Python?

I wonder is there any easy way to do geometric mean using python but without using python package. If there is not, is there any simple package to do geometric mean?

Solution 1:

The formula of the gemetric mean is:

So you can easily write an algorithm like:

import numpy as np

defgeo_mean(iterable):
    a = np.array(iterable)
    return a.prod()**(1.0/len(a))

You do not have to use numpy for that, but it tends to perform operations on arrays faster than Python. See this answer for why.

In case the chances of overflow are high, you can map the numbers to a log domain first, calculate the sum of these logs, then multiply by 1/n and finally calculate the exponent, like:

import numpy as np

defgeo_mean_overflow(iterable):
    return np.exp(np.log(iterable).mean())

Solution 2:

In case someone is looking here for a library implementation, there is gmean() in scipy, possibly faster and numerically more stable than a custom implementation:

>>>from scipy.stats.mstats import gmean>>>gmean([1.0, 0.00001, 10000000000.])
46.415888336127786

Compatible with both Python 2 and 3.*

Solution 3:

Starting Python 3.8, the standard library comes with the geometric_mean function as part of the statistics module:

from statistics import geometric_mean

geometric_mean([1.0, 0.00001, 10000000000.])// 46.415888336127786

Solution 4:

Here's an overflow-resistant version in pure Python, basically the same as the accepted answer.

import math

defgeomean(xs):
    return math.exp(math.fsum(math.log(x) for x in xs) / len(xs))

Solution 5:

just do this:

numbers = [1, 3, 5, 7, 10]


print reduce(lambda x, y: x*y, numbers)**(1.0/len(numbers))