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I currently want to sort a hudge fasta file (+10**8 lines and sequences) by sequence size. fasta is… Read more Sort Fasta By Sequence Size

I have the following data (small part of it) named 'short2_pre_snp_tumor.txt' rs987435 … Read more Convert Text File To Plink Ped And Map Format

I have a FASTA file with IDs and corresponding DNA sequences which I have parsed and stored into a … Read more Hamming Distance Matrix For Multiple Sequences

I am trying to find corresponding keys in two different dictionaries. Each has about 600k entries.… Read more Finding Matching Keys In Two Large Dictionaries And Doing It Fast

I'm trying to implement the Smith-Waterman algorithm for local sequence alignment using the aff… Read more Traceback In Smith-wateman Algorithm With Affine Gap Penalty

I have the following data (small part of it) named 'short2_pre_snp_tumor.txt' rs987435 … Read more Convert Text File To Plink PED And MAP Format